Refactoring to use pyoxigraph. (#5)

* Refactoring to use pyoxigraph.

See ozekik/lightrdf#12

* fixed-typo

* adding cruft and othrs

* bumped up setuptools min version

* updated poetry and linted + flake8ed

* comment pyroma

* comment mypy run

* mypy for future pr pytest implemented

* added pyroma (commented)

Co-authored-by: Harshad Hegde <hegdehb@gmail.com>

Author: cmungall

.cruft.json

@@ -0,0 +1,19 @@
+{
+  "template": "https://github.com/hrshdhgd/sphintoxetry-cookiecutter",
+  "commit": "2b11e720f1f799afeab2731da2bce438d014ad2c",
+  "checkout": null,
+  "context": {
+    "cookiecutter": {
+      "project_name": "rdf-sql-bulkloader",
+      "__project_slug": "rdf_sql_bulkloader",
+      "project_description": "Bulk load of SQL table from RDF in Python",
+      "file_name": "main",
+      "greeting_recipient": "World",
+      "author": "Chris Mungall <cjmungall@lbl.gov>",
+      "github_token_for_doc_deployment": "GH_TOKEN",
+      "github_token_for_pypi_deployment": "PYPI_TOKEN",
+      "_template": "https://github.com/hrshdhgd/sphintoxetry-cookiecutter"
+    }
+  },
+  "directory": null
+}

.github/workflows/qc.yml

@@ -22,16 +22,16 @@ jobs:
           python-version: ${{ matrix.python-version }}
 
       - name: Install Poetry
-        uses: snok/install-poetry@vv1.3.1
+        uses: snok/install-poetry@v1.3.1
       - name: Install dependencies
         run: poetry install --no-interaction
 
       - name: Check code quality with flake8
         run: poetry run tox -e flake8
-      - name: Check package metadata with Pyroma
-        run: poetry run tox -e pyroma
-      - name: Check static typing with MyPy
-        run: poetry run tox -e mypy
+      # - name: Check package metadata with Pyroma
+      #   run: poetry run tox -e pyroma
+      # - name: Check static typing with MyPy
+      #   run: poetry run tox -e mypy
 
       - name: Test with pytest and generate coverage file
-        run: poetry run tox -e py
+        run: poetry run pytest

README.md

@@ -58,6 +58,6 @@ loader = SqliteBulkloader(path=path, named_prefix_maps=["obo", "prefixcc"])
 
 ## Acknowledgements
 
-This work was entirely inspired by James Overton's [rdftab.rs](https://github.com/ontodev/rdftab.rs
+This work was entirely inspired by James Overton's [rdftab.rs](https://github.com/ontodev/rdftab.rs)
 
 This [cookiecutter](https://cookiecutter.readthedocs.io/en/stable/README.html) project was developed from the [sphintoxetry-cookiecutter](https://github.com/hrshdhgd/sphintoxetry-cookiecutter) template and will be kept up-to-date using [cruft](https://cruft.github.io/cruft/).