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douwedouwe
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nickel scheme
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‎data-raw/guide_competition_1_0_source.ncl‎

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let Version = std.contract.from_predicate (std.string.is_match "^\\d+\\.\\d+$")
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in
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let Nullable = fun Contract =>
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std.contract.custom
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(fun value =>
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if value == null then
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'Ok value
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else
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std.contract.check Contract value
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)
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in
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let Cell = std.contract.from_predicate (std.string.is_match "^[A-Z]\\d+$")
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in
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let Range = std.contract.from_predicate (std.string.is_match "^[A-Z]\\d+:[A-Z]\\d+$")
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# in
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#
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# let Range = std.contract.from_predicate (std.string.split ":")
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in
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let Variable = {
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cell | Cell,
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name | String
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}
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in
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let Translation = {
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long | String,
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short | String
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}
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in
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let Atom = std.contract.from_predicate (fun value =>
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std.array.elem value [ "character", "date", "numeric" ]
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)
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in
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let Location = {
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sheet | String,
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varname | String,
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type | std.enum.TagOrString
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| [| 'cells, 'keyvalue, 'table, 'platedata |],
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translate | Bool
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| optional
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| default
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= false,
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variables | Array Variable
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| optional,
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atomicclass | Array Atom
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| optional,
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ranges | Array Range
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| optional
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}
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in
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let Schema = {
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guide.version | Version,
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locations | Array Location,
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plate.format | Number,
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template.max.version | Nullable (Version),
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template.min.version | Version,
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template.name | String,
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translations | Array Translation
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}
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in
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{
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guide.version = "1.0",
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template.max.version = null,
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template.min.version = "9.3",
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template.name = "competition",
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plate.format = 96,
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locations = [
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{
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sheet = "description",
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translate = false,
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type = "cells",
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variables = [
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{
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cell = "B2",
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name = "version"
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}
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],
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varname = ".template"
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},
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{
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atomicclass = [
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"character",
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"character",
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"character",
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"character",
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"character",
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"date",
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"character",
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"numeric",
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"character",
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"numeric",
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"character",
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"numeric",
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"character",
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"character"
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],
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ranges = [
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"A10:B21",
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"A24:B25"
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],
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sheet = "description",
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translate = true,
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type = "keyvalue",
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varname = "metadata"
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},
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{
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atomicclass = [
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"character",
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"numeric",
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"numeric",
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"numeric",
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"numeric",
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"numeric",
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"numeric",
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"character",
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"character",
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"character"
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],
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ranges = [
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"A1:M9",
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"A11:M19",
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"A21:M29",
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"A31:M39",
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"A41:M49",
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"A51:M59",
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"A61:M69",
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"A71:M79",
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"A81:M89",
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"A91:M99"
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],
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sheet = "_data",
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translate = false,
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type = "platedata",
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varname = "plate"
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},
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{
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ranges = [
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"A101:B111"
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],
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sheet = "_data",
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translate = false,
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type = "table",
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varname = "rejections"
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},
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{
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atomicclass = [
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"numeric"
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],
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ranges = [
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"A24:B24",
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"A27:B28",
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"A31:B32",
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"A35:B36"
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],
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sheet = "_parameters",
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translate = false,
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type = "keyvalue",
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varname = "parameters"
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},
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{
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ranges = [
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"A39:B39"
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],
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sheet = "_parameters",
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translate = false,
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type = "keyvalue",
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varname = "parameters"
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},
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{
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atomicclass = [
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"numeric"
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],
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ranges = [
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"J3:M5"
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],
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sheet = "concentration response",
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translate = false,
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type = "table",
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varname = "userresults"
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},
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{
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atomicclass = [
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"numeric"
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],
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sheet = "BGfluo",
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translate = false,
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type = "cells",
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variables = [
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{
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cell = "G6",
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name = "spread.itm1"
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},
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{
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cell = "G33",
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name = "spread.itm2"
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}
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],
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varname = "userchecks"
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},
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{
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sheet = "plate + experiment control",
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translate = false,
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type = "cells",
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variables = [
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{
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cell = "C27",
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name = "rfu.rc.ref"
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},
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{
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cell = "C28",
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name = "rfu.t4.ref"
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}
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],
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varname = "userresults"
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}
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],
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translations = [
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{
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"long" = "Version",
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"short" = "template.version"
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},
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{
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"long" = "Template Name",
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"short" = "template.name"
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},
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{
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"long" = "Study identifier",
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"short" = "studyID"
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},
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{
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"long" = "Experiment identifier",
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"short" = "exptID"
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},
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{
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"long" = "Plate identifier",
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"short" = "plateID"
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},
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{
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"long" = "Run identifier",
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"short" = "runID"
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},
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{
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"long" = "Instrument identifier",
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"short" = "instrID"
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},
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{
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"long" = "Experimenter name",
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"short" = "experimenter"
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},
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{
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"long" = "Date of experiment",
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"short" = "date"
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},
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{
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"long" = "Laboratory identifier",
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"short" = "labID"
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},
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{
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"long" = "Temperature (C)",
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"short" = "temp"
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},
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{
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"long" = "Item 1",
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"short" = "itm1ID"
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},
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{
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"long" = "Molar mass 1",
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"short" = "itm1Mw"
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},
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{
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"long" = "Run identifier 1",
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"short" = "run1ID"
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},
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{
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"long" = "Item 2",
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"short" = "itm2ID"
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},
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{
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"long" = "Molar mass 2",
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"short" = "itm2Mw"
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},
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{
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"long" = "Run identifier 2",
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"short" = "run2ID"
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}
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]
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} | Schema

‎data-raw/shema_guide.ncl‎

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Schema = {
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guide.version | String,
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locations | _,
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plate.format | 96,
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template.max.version" | null,
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template.min.version | String,
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template.name | "competition",
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translations | _
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}
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