fix subsetting for station profiles

Author: Hailey Johnson

cdm/core/src/main/java/ucar/nc2/ft/point/writer/WriterCFStationProfileCollection.java

@@ -94,11 +94,16 @@ public int writeProfile(StationProfileFeature spf, ProfileFeature profile) throw
       writeObsData(pf);
       count++;
     }
+    Integer stnIndex = stationIndexMap.get(spf.getName());
+    if (stnIndex == null) {
+      log.warn("BAD station {}", spf.getName());
+    } else {
+      writeProfileData(stnIndex, profile, count);
+    }
     return count;
   }
 
   public void writeHeader(List<StationFeature> stations) throws IOException {
-
     List<VariableSimpleIF> obsCoords = new ArrayList<>();
     List<PointFeatureCollection> flattenStations = new ArrayList<>();
     List<StructureData> featureData = new ArrayList<>();
@@ -133,35 +138,19 @@ public void writeHeader(List<StationFeature> stations) throws IOException {
     for (StationFeature sf : stnList) {
       writeStationData(sf);
       stationIndexMap.put(sf.getName(), count);
-      for (ProfileFeature p : (StationProfileFeature) sf) {
-        int countPoints = 0;
-        if (p.size() >= 0) {
-          countPoints += p.size();
-        } else {
-          countPoints += Iterables.size(p);
-        }
-        writeProfileData(count, p, countPoints);
-      }
+      // for (ProfileFeature p : (StationProfileFeature) sf) {
+      // int countPoints = 0;
+      // if (p.size() >= 0) {
+      // countPoints += p.size();
+      // } else {
+      // countPoints += Iterables.size(p);
+      // }
+      // writeProfileData(count, p, countPoints);
+      // }
       count++;
     }
   }
 
-  @Override
-  public void setFeatureAuxInfo(int nfeatures, int id_strlen) {
-    int countProfiles = 0;
-    int name_strlen = 0;
-    for (StationFeature s : stnList) {
-      name_strlen = Math.max(name_strlen, s.getName().length());
-      if (((StationProfileFeature) s).size() >= 0)
-        countProfiles += ((StationProfileFeature) s).size();
-      else {
-        countProfiles += Iterables.size(((StationProfileFeature) s));
-      }
-    }
-    this.nfeatures = countProfiles;
-    this.id_strlen = name_strlen;
-  }
-
   protected void makeFeatureVariables(List<StructureData> stnDataStructs, boolean isExtended) {
     // add the dimensions : extended model can use an unlimited dimension
     // Dimension stationDim = isExtended ? writer.addDimension(null, stationDimName, 0, true, true, false) :