ci: Add some more coverage

Author: JDBetteridge

.github/workflows/pytest-core-mpi.yaml

@@ -113,20 +113,30 @@ jobs:
         env: |
           CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }}
           OMP_NUM_THREADS=1
-        command: "pytest -v tests/test_mpi.py"
+        command: |
+          pytest \
+          -v \
+          --cov \
+          --cov-config=.coveragerc \
+          --cov-report=xml \
+          tests/test_mpi.py"
 
     - name: Test acoustic and TTI examples with MPI
       uses: ./.github/actions/docker-run
       with:
         uid: ${{ steps.build.outputs.unique }}
         tag: ${{ matrix.name }}
         env: |
+          CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }}
           DEVITO_MPI=1
           OMP_NUM_THREADS=1
         command: |
           mpiexec -n 2 \
             pytest \
               -v \
+              --cov \
+              --cov-config=.coveragerc \
+              --cov-report=xml \
               examples/seismic/acoustic \
               examples/seismic/tti
 

.github/workflows/pytest-gpu.yaml

@@ -116,7 +116,15 @@ jobs:
         tag: ${{ matrix.name }}
         args: ${{ matrix.dockerflags }}
         env: |
-        command: pytest -v ${{ matrix.test_examples }}
+          CI=true
+          CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }}
+        command: |
+          pytest \
+            -v \
+            --cov \
+            --cov-config=.coveragerc \
+            --cov-report=xml \
+            ${{ matrix.test_examples }}
 
     - name: Test examples with MPI
       uses: ./.github/actions/docker-run
@@ -125,9 +133,18 @@ jobs:
         tag: ${{ matrix.name }}
         args: ${{ matrix.dockerflags }}
         env: |
+          CI=true
+          CODECOV_TOKEN=${{ secrets.CODECOV_TOKEN }}
           DEVITO_LOGGING=DEBUG
           DEVITO_MPI=1
-        command: mpiexec -n 2 pytest -v ${{ matrix.test_examples }}
+        command: |
+          mpiexec -n 2 \
+            pytest \
+              -v \
+              --cov \
+              --cov-config=.coveragerc \
+              --cov-report=xml \
+              ${{ matrix.test_examples }}
 
     - name: Cleanup docker image
       if: always()

.github/workflows/tutorials.yaml

@@ -74,16 +74,7 @@ jobs:
           --nbval \
           -k 'not dask' \
           -k 'not synthetics' \
-          examples/cfd \
-          examples/compiler \
-          examples/finance \
-          examples/performance \
-          examples/seismic/abc_methods \
-          examples/seismic/acoustic/accuracy.ipynb \
-          examples/seismic/self_adjoint \
-          examples/seismic/tutorials \
-          examples/timestepping \
-          examples/userapi
+          examples
 
     - name: Failing notebooks
       # TODO: Fix or skip this