updated data file paths

Author: e-marshall

.gitignore

@@ -3,7 +3,7 @@ _build
 _static 
 
 #Data 
-**/data/*
+**/data/raster_data/*
 
 #Extra nbs
 sentinel1/subste_nbs

book/itslive/data/vector_data/bbox_dc.geojson

@@ -0,0 +1,7 @@
+{
+"type": "FeatureCollection",
+"crs": { "type": "name", "properties": { "name": "urn:ogc:def:crs:EPSG::32646" } },
+"features": [
+{ "type": "Feature", "properties": { }, "geometry": { "type": "Polygon", "coordinates": [ [ [ 700132.5, 3300067.5 ], [ 799972.5, 3300067.5 ], [ 799972.5, 3399907.5 ], [ 700132.5, 3399907.5 ], [ 700132.5, 3300067.5 ] ] ] } }
+]
+}

book/itslive/data/vector_data/rgi7_region15_south_asia_east.parquet

@@ -572,7 +572,7 @@
  "metadata": {
   "celltoolbar": "Tags",
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -586,7 +586,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   }
  },
  "nbformat": 4,

book/itslive/data/vector_data/single_glacier_vec.json

@@ -545,7 +545,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -559,7 +559,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   }
  },
  "nbformat": 4,

book/itslive/nbs/1_accessing_itslive_s3_data.ipynb

@@ -296,7 +296,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "se_asia = gpd.read_parquet(\"../data/rgi7_region15_south_asia_east.parquet\")"
+    "se_asia = gpd.read_parquet(\"../data/vector_data/rgi7_region15_south_asia_east.parquet\")"
    ]
   },
   {
@@ -484,7 +484,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "bbox_dc.to_file(\"../data/bbox_dc.geojson\")"
+    "bbox_dc.to_file(\"../data/vector_data/bbox_dc.geojson\")"
    ]
   },
   {
@@ -623,8 +623,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "TODO\n",
-    "2/26 running this i got a ClientResponseError:500 when trying to write to zarr. Added in above two steps and it worked, not entirely sure why? if keep these in, add explanation."
+    "Now, let's try to write the object as a Zarr group."
    ]
   },
   {
@@ -634,17 +633,10 @@
    "outputs": [],
    "source": [
     "single_glacier_raster.drop_encoding().to_zarr(\n",
-    "    \"../data/single_glacier_itslive.zarr\", mode=\"w\"\n",
+    "    \"../data/raster_data/single_glacier_itslive.zarr\", mode=\"w\"\n",
     ")"
    ]
   },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "Now, let's try to write the object as a Zarr group."
-   ]
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -657,7 +649,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -671,7 +663,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   }
  },
  "nbformat": 4,

book/itslive/nbs/2_larger_than_memory_data.ipynb

@@ -154,10 +154,10 @@
    "source": [
     "# Read raster\n",
     "single_glacier_raster = xr.open_zarr(\n",
-    "    \"../data/single_glacier_itslive.zarr\", decode_coords=\"all\"\n",
+    "    \"../data/raster_data/single_glacier_itslive.zarr\", decode_coords=\"all\"\n",
     ")\n",
     "# Read vector\n",
-    "single_glacier_vector = gpd.read_file(\"../data/single_glacier_vec.json\")"
+    "single_glacier_vector = gpd.read_file(\"../data/vector_data/single_glacier_vec.json\")"
    ]
   },
   {
@@ -1373,7 +1373,7 @@
  "metadata": {
   "celltoolbar": "Tags",
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -1387,7 +1387,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   }
  },
  "nbformat": 4,

book/itslive/nbs/3_combining_raster_vector_data.ipynb

@@ -255,7 +255,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "se_asia = gpd.read_parquet(\"../data/rgi7_region15_south_asia_east.parquet\")\n",
+    "se_asia = gpd.read_parquet(\"../data/vector_data/rgi7_region15_south_asia_east.parquet\")\n",
     "\n",
     "se_asia.head(3)"
    ]
@@ -516,7 +516,7 @@
     "    ```python\n",
     "    with ProgressBar():\n",
     "\n",
-    "        encoded_vdc.to_zarr('../data/regional_glacier_velocity_vector_cube.zarr', mode='w')\n",
+    "        encoded_vdc.to_zarr('../data/raster_data/regional_glacier_velocity_vector_cube.zarr', mode='w')\n",
     "    ```\n",
     "    Output:\n",
     "    [########################################] | 100% Completed | 12m 15s"
@@ -548,7 +548,7 @@
    "outputs": [],
    "source": [
     "vector_data_cube_cf = xr.open_zarr(\n",
-    "    os.path.join(tutorial1_dir, \"data/regional_glacier_velocity_vector_cube.zarr\")\n",
+    "    os.path.join(tutorial1_dir, \"data/raster_data/regional_glacier_velocity_vector_cube.zarr\")\n",
     ")\n",
     "vector_data_cube = vector_data_cube_cf.xvec.decode_cf().compute()"
    ]
@@ -663,7 +663,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -677,7 +677,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   }
  },
  "nbformat": 4,

book/itslive/nbs/4_exploratory_data_analysis_single.ipynb

@@ -179,7 +179,7 @@
    "outputs": [],
    "source": [
     "timeseries_type = \"full\"\n",
-    "path_to_rtcs = f\"data/{timeseries_type}_timeseries/asf_rtcs\"\n"
+    "path_to_rtcs = f\"data/raster_data/{timeseries_type}_timeseries/asf_rtcs\"\n"
    ]
   },
   {
@@ -407,8 +407,8 @@
     "    \"\"\"Function to create VRT files for each variable given a\n",
     "    list of file paths fo that variable.\"\"\"\n",
     "\n",
-    "    full_timeseries_data = '../data/full_timeseries'\n",
-    "    subset_timeseries_data = '../data/subset_timeseries'\n",
+    "    full_timeseries_data = '../data/raster_data/full_timeseries'\n",
+    "    subset_timeseries_data = '../data/raster_data/subset_timeseries'\n",
     "\n",
     "    if timeseries_type == 'full':\n",
     "        data_path = full_timeseries_data\n",
@@ -473,9 +473,9 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "ds_vv = xr.open_dataset(f\"../data/{timeseries_type}_timeseries/vrt_files/s1_stack_vv.vrt\", chunks=\"auto\")\n",
-    "ds_vh = xr.open_dataset(f\"../data/{timeseries_type}_timeseries/vrt_files/s1_stack_vh.vrt\", chunks=\"auto\")\n",
-    "ds_ls = xr.open_dataset(f\"../data/{timeseries_type}_timeseries/vrt_files/s1_stack_ls_map.vrt\", chunks=\"auto\")"
+    "ds_vv = xr.open_dataset(f\"../data/raster_data/{timeseries_type}_timeseries/vrt_files/s1_stack_vv.vrt\", chunks=\"auto\")\n",
+    "ds_vh = xr.open_dataset(f\"../data/raster_data/{timeseries_type}_timeseries/vrt_files/s1_stack_vh.vrt\", chunks=\"auto\")\n",
+    "ds_ls = xr.open_dataset(f\"../data/raster_data/{timeseries_type}_timeseries/vrt_files/s1_stack_ls_map.vrt\", chunks=\"auto\")"
    ]
   },
   {
@@ -518,7 +518,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
+   "display_name": "geospatial_datacube_book_env",
    "language": "python",
    "name": "python3"
   },
@@ -532,7 +532,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.11.3"
   },
   "widgets": {
    "application/vnd.jupyter.widget-state+json": {