Use utils::osVersion in all HPC examples [ci skip]

Author: HenrikBengtsson

R/batchtools_lsf.R

@@ -50,10 +50,11 @@ BatchtoolsLsfFutureBackend <- function(...) {
 #'
 #' f <- future({
 #'   data.frame(
-#'     hostname = Sys.info()[["nodename"]],
-#'           os = Sys.info()[["sysname"]],
-#'        cores = unname(parallelly::availableCores()),
-#'      modules = Sys.getenv("LOADEDMODULES")
+#'      hostname = Sys.info()[["nodename"]],
+#'            os = Sys.info()[["sysname"]],
+#'     osVersion = utils::osVersion,
+#'         cores = unname(parallelly::availableCores()),
+#'       modules = Sys.getenv("LOADEDMODULES")
 #'   )
 #' })
 #' info <- value(f)

R/batchtools_openlava.R

@@ -50,10 +50,11 @@ BatchtoolsOpenLavaFutureBackend <- function(...) {
 #'
 #' f <- future({
 #'   data.frame(
-#'     hostname = Sys.info()[["nodename"]],
-#'           os = Sys.info()[["sysname"]],
-#'        cores = unname(parallelly::availableCores()),
-#'      modules = Sys.getenv("LOADEDMODULES")
+#'      hostname = Sys.info()[["nodename"]],
+#'            os = Sys.info()[["sysname"]],
+#'     osVersion = utils::osVersion,
+#'         cores = unname(parallelly::availableCores()),
+#'       modules = Sys.getenv("LOADEDMODULES")
 #'   )
 #' })
 #' info <- value(f)

R/batchtools_sge.R

@@ -65,10 +65,11 @@ print.BatchtoolsSGEFutureBackend <- function(x, ...) {
 #'
 #' f <- future({
 #'   data.frame(
-#'     hostname = Sys.info()[["nodename"]],
-#'           os = Sys.info()[["sysname"]],
-#'        cores = unname(parallelly::availableCores()),
-#'      modules = Sys.getenv("LOADEDMODULES")
+#'      hostname = Sys.info()[["nodename"]],
+#'            os = Sys.info()[["sysname"]],
+#'     osVersion = utils::osVersion,
+#'         cores = unname(parallelly::availableCores()),
+#'       modules = Sys.getenv("LOADEDMODULES")
 #'   )
 #' })
 #' info <- value(f)

R/batchtools_slurm.R

@@ -134,7 +134,8 @@ print.BatchtoolsSlurmFutureBackend <- function(x, ...) {
 #'      hostname = Sys.info()[["nodename"]],
 #'            os = Sys.info()[["sysname"]],
 #'     osVersion = utils::osVersion,
-#'         cores = unname(parallelly::availableCores())
+#'         cores = unname(parallelly::availableCores()),
+#'       modules = Sys.getenv("LOADEDMODULES")
 #'   )
 #' })
 #' info <- value(f)

R/batchtools_torque.R

@@ -49,9 +49,11 @@ BatchtoolsTorqueFutureBackend <- function(...) {
 #'
 #' f <- future({
 #'   data.frame(
-#'     hostname = Sys.info()[["nodename"]],
-#'           os = Sys.info()[["sysname"]],
-#'        cores = unname(parallelly::availableCores())
+#'      hostname = Sys.info()[["nodename"]],
+#'            os = Sys.info()[["sysname"]],
+#'     osVersion = utils::osVersion,
+#'         cores = unname(parallelly::availableCores()),
+#'       modules = Sys.getenv("LOADEDMODULES")
 #'   )
 #' })
 #' info <- value(f)