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Update diffusion.rst
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@@ -48,25 +48,32 @@ Methods with statistical normalisation
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magnitude of the {raw} scores and the effect of the network topology: this is a quantification of the relative change
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in the node score before and after the network smoothing.
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Summary Table
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-------------
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| Scores | y+ | y- | yn | Normalized | Stochastic | Quantitative | Reference
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Unnormalized
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| raw | 1 | 0 | 0 | No | No | Yes | Vandin (2010) |
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| ml | 1 | -1 | 0 | No | No | No | Tsuda (2010) |
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| gm | 1 | -1 | k | No | No | No | Mostafavi (2008) |
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| ber_s | 1 | 0 | 0 | No | No | Yes | Bersanelli (2016)|
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Normalized
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| ber_p | 1 | 0 | 0* | Yes | Yes | Yes | Bersanelli (2016)|
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| mc | 1 | 0 | 0* | Yes | Yes | Yes | Bersanelli (2016)|
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| z | 1 | 0 | 0* | Yes | No | Yes | Harchaoui (2013) |
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Summary table of methods without statistical normalization
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----------------------------------------------------------
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| Scores | y+ | y- | yn | Normalized | Stochastic | Quantitative | Reference |
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+===========================================+===================================+======================================+
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| raw | 1 | 0 | 0 | No | No. | Yes | Vandin (2010) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| ml | 1 | -1 | 0 | No | No | No | Tsuda (2010) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| gm | 1 | -1 | k | No | No | No | Mostafavi (2008) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| ber_s | 1 | 0 | 0 | No | No | Yes | Bersanelli (2016) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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Summary table of methods with statistical normalization
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-------------------------------------------------------
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| Scores | y+ | y- | yn | Normalized | Stochastic | Quantitative | Reference |
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+===========================================+===================================+======================================+
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| ber_p | 1 | 0 | 0* | Yes | Yes | Yes | Bersanelli (2016) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| mc | 1 | 0 | 0* | Yes | Yes | Yes | Bersanelli (2016) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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| z | 1 | 0 | 0* | Yes | No | Yes | Harchaoui (2013) |
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+-------------+----------+----------+----------+---------------+----------------+----------------+---------------------+
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.. automodule:: diffupy.diffusion

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