Add parser ground truth tooling and arXiv dataset#64
Draft
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
data_collection/:ground_truth.py— queries arXiv API to collect verified reference articles (LaTeX source = clean ground truth, no PDF extraction artifacts)download_ground_truth.py— downloads PDFs and extracts.texsource text in parallel, producing a localverified_ground_truth_data/corpus for parser benchmarkingverified_ground_truth.csv— committed seed dataset of 33 arXiv articles across vaccine/autism and control categoriesIngestionRun/ParsedArtifactfactory stubsTest plan
pytest tests/ingestion/test_models.py— all model tests passmanage.py migrate)python -m eu_fact_force.ingestion.data_collection.ground_truth --vaccine-limit 5 --other-limit 5and confirm CSV outputpython -m eu_fact_force.ingestion.data_collection.download_ground_truth --csv verified_ground_truth.csv --output-dir /tmp/gt_test --workers 2and verify PDFs + .txt files are written