Imageomics Institute
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116 repositories
repo-exporter
PublicA Python script that collects key info (Name, description, creation date, last updated date, contributors, etc.) from all repos in a GitHub organization and sav…- Code repository for HComP-Net (ICLR'25)
- Catalog app for Imageomics code, data, models, and spaces hosted on GitHub and Hugging Face. Designed for improved discoverability of Imageomics products, the c…
imageomics.github.io
Public- Python package and CLI that simplifies using the BioCLIP family of foundation models.
KABR
Public- Modular tools pipeline for annotating animal behavior. These were specifically designed during construction of the KABR dataset, and have been generalized with …
fair_drones
PublicThe FAIR² Drones Data Standard provides a comprehensive framework for documenting drone-based wildlife datasets, ensuring they are Findable, Accessible, Interop…Finer-CAM
PublicThis is an official implementation for Finer-CAM: Spotting the Difference Reveals Finer Details for Visual Explanation. [CVPR'25] Better understand discriminati…- Tools tutorials for the first Imageomics Conference.
saev-demo
Publicsaev-fish-dev
Publicdna-trait-analysis
Publicemb-explorer
PublicAn interactive tool for classifying images with a pretrained model and exploring clustering results in 2D space.TaxaAdapter
PublicTraitBlender
PublicBlender addon for simulating raw datasets under known evolutionary modelsSST
PublicOfficial repo for paper "Static Segmentation by Tracking: A Frustratingly Label-Efficient Approach to Fine-Grained Segmentation". Ideal for specimen image trait…wildwing
Publicbioclip-ecosystem
Publichpc-inference
PublicTaxonoPy
Publicopen-set-atlas
Public- Sample Submission Repository for the 2025 HDR Scientific Mood Challenge (Modeling out of distribution).
HDR-SMood-Challenge
PublicRepository for Imageomics' CodaBench challenge as part of the HDR Scientific Mood ML Challenge.HDR-anomaly-challenge
PublicRepository for Imageomics' CodaBench challenge as part of the HDR Anomaly ML Challenge.- Sample Submission Repository for the 2024 HDR Anomaly Challenge
- Lightweight BioCLIP image search service using source URLs, FAISS, and DuckDB. Find the most visually similar images across 200M+ samples from the TreeofLife da…
distributed-downloader
PublicMPI-based distributed downloading tool for retrieving data from diverse domains.
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